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Bilbao A., Gibbons B.C, Slysz G.W, Crowell K.L, Monroe M.E, Ibrahim Y.M, Smith R.D, Payne S.H, Baker E.S.  2018.  An algorithm to correct saturated mass spectrometry ion abundances for enhanced quantitation and mass accuracy in omic studies. Int J Mass Spectrom.
Orton D.J, Tfaily M.M, Moore R.J, LaMarche B.L, Zheng X., Fillmore T.L, Chu R.K, Weitz K.K, Monroe M.E, Kelly R.T et al..  2018.  A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements. Anal. Chem..
Menachery V.D, Schafer A., Burnum-Johnson K.E, Mitchell H.D, Eisfeld A.J, Walters K.B, Nicora C.D, Purvine S.O, Casey C.P, Monroe M.E et al..  2018.  MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape. Proc. Natl. Acad. Sci. U.S.A..
Stanfill B.A, Nakayasu E.S, Bramer L.M, Thompson A.M, Ansong C.K, Clauss T.R, Gritsenko M.A, Monroe M.E, Moore R.J, Orton D.J et al..  2018.  Quality Control Analysis in Real-time (QC-ART): A Tool for Real-time Quality Control Assessment of Mass Spectrometry-based Proteomics Data. Mol. Cell Proteomics.
Mertins P., Tang L.C, Krug K., Clark D.J, Gritsenko M.A, Chen L., Clauser K.R, Clauss T.R, Shah P., Gillette M.A et al..  2018.  Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry. Nat Protoc.
Zhang Q, Petyuk VA, Schepmoes AA, Orton DJ, Monroe ME, Yang F, Smith RD, Metz TO.  2008.  Analysis of non-enzymatically glycated peptides: neutral-loss-triggered MS(3) versus multi-stage activation tandem mass spectrometry.. Rapid Commun Mass Spectrom.
Metz TO, Qian W-J, Jacobs JM, Gritsenko MA, Moore RJ, Polpitiya AD, Monroe ME, Camp DG, Mueller PW, Smith RD.  2008.  Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset.. J Proteome Res.
Ding J, Sorensen CM, Jaitly N, Jiang H, Orton DJ, Monroe ME, Moore RJ, Smith RD, Metz TO.  2008.  Application of the accurate mass and time tag approach in studies of the human blood lipidome.. J Chromatogr B Analyt Technol Biomed Life Sci.
Petyuk VA, Jaitly N, Moore RJ, Ding J, Metz TO, Tang K, Monroe ME, Tolmachev AV, Adkins JN, Belov ME et al..  2008.  Elimination of systematic mass measurement errors in liquid chromatography-mass spectrometry based proteomics using regression models and a priori partial knowledge of the sample content.. Anal Chem.
Monroe ME, Shaw JL, Daly DS, Adkins JN, Smith RD.  2008.  MASIC: a software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC-MS(/MS) features.. Comput Biol Chem.
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