U.S. Department of Energy

Pacific Northwest National Laboratory


Export 175 results:
Zhu Y., Piehowski P.D, Zhao R., Chen J., Shen Y., Moore R.J, Shukla A.K, Petyuk V.A, Campbell-Thompson M., Mathews C.E et al..  2018.  Nanodroplet processing platform for deep and quantitative proteome profiling of 10-100 mammalian cells. Nat Commun.
Dou M., Chouinard C.D, Zhu Y., Nagy G., Liyu A.V, Ibrahim Y.M, Smith R.D, Kelly R.T.  2018.  Nanowell-mediated multidimensional separations combining nanoLC with SLIM IM-MS for rapid, high-peak-capacity proteomic analyses. Anal Bioanal Chem.
Stevens S.L, Liu T., Bahjat F.R, Petyuk V.A, Schepmoes A.A, Sontag R.L, Gritsenko M.A, Wu C., Wang S., Shukla A.K et al..  2018.  Preconditioning in the Rhesus Macaque Induces a Proteomic Signature Following Cerebral Ischemia that Is Associated with Neuroprotection. Transl Stroke Res.
Zhu Y., Clair G., Chrisler W.B, Shen Y., Zhao R., Shukla A.K, Moore R.J, Misra R.S, Pryhuber G.S, Smith R.D et al..  2018.  Proteomic Analysis of Single Mammalian Cells Enabled by Microfluidic Nanodroplet Sample Preparation and Ultrasensitive NanoLC-MS. Angew. Chem. Int. Ed. Engl..
Khanova E., Wu R., Wang W., Yan R., Chen Y., French S.W, Llorente C., Pan S.Q, Yang Q., Li Y. et al..  2018.  Pyroptosis by caspase11/4-gasdermin-D pathway in alcoholic hepatitis in mice and patients. Hepatology.
Stanfill B.A, Nakayasu E.S, Bramer L.M, Thompson A.M, Ansong C.K, Clauss T.R, Gritsenko M.A, Monroe M.E, Moore R.J, Orton D.J et al..  2018.  Quality Control Analysis in Real-time (QC-ART): A Tool for Real-time Quality Control Assessment of Mass Spectrometry-based Proteomics Data. Mol. Cell Proteomics.
Chouinard C.D, Nagy G., Webb I.K, Garimella S.VB, Baker E.S, Ibrahim Y.M, Smith R.D.  2018.  Rapid Ion Mobility Separations of Bile Acid Isomers Using Cyclodextrin Adducts and Structures for Lossless Ion Manipulations. Anal. Chem..
Mertins P., Tang L.C, Krug K., Clark D.J, Gritsenko M.A, Chen L., Clauser K.R, Clauss T.R, Shah P., Gillette M.A et al..  2018.  Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry. Nat Protoc.
Guo J., Wilken S., Jimenez V., Choi C.J, Ansong C., Dannebaum R., Sudek L., Milner D.S, Bachy C., Reistetter E.N et al..  2018.  Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation. Nat Microbiol.
Zhu Y., Zhao R., Piehowski P.D, Moore R.J, Lim S., Orphan V.J, Pa?a-Toli? L., Qian W.J, Smith R.D, Kelly R.T.  2018.  Subnanogram proteomics: impact of LC column selection, MS instrumentation and data analysis strategy on proteome coverage for trace samples. Int J Mass Spectrom.
Jayasinghe R.G, Cao S., Gao Q., Wendl M.C, Vo N.S, Reynolds S.M, Zhao Y., Climente-Gonzalez H., Chai S., Wang F. et al..  2018.  Systematic Analysis of Splice-Site-Creating Mutations in Cancer. Cell Rep.
Wells A., Wiley H.S.  2018.  A systems perspective of heterocellular signaling. Essays Biochem..
Yu L., Petyuk V.A, Gaiteri C., Mostafavi S., Young-Pearse T., Shah R.C, Buchman A.S, Schneider J.A, Piehowski P.D, Sontag R.L et al..  2018.  Targeted brain proteomics uncover multiple pathways to Alzheimer's dementia. Ann. Neurol..
Yu L., Petyuk V.A, Gaiteri C., Mostafavi S., Young-Pearse T., Shah R.C, Buchman A.S, Schneider J.A, Piehowski P.D, Sontag R.L et al..  2018.  Targeted brain proteomics uncover multiple pathways to Alzheimer's dementia. Ann. Neurol..
Yi L., Shi T., Gritsenko M.A, Chan C.YX'avia, Fillmore T.L, Hess B.M, Swensen A.C, Liu T., Smith R.D, Wiley H.S et al..  2018.  Targeted Quantification of Phosphorylation Dynamics in the Context of EGFR-MAPK Pathway. Anal. Chem..
Garabedian A., Benigni P., Ramirez C.E, Baker E.S, Liu T., Smith R.D, Fernandez-Lima F..  2018.  Towards Discovery and Targeted Peptide Biomarker Detection Using nanoESI-TIMS-TOF MS. J. Am. Soc. Mass Spectrom..
Nagy G., Attah I.K, Garimella S.VB, Tang K., Ibrahim Y.M, Baker E.S, Smith R.D.  2018.  Unraveling the isomeric heterogeneity of glycans: ion mobility separations in structures for lossless ion manipulations. Chem. Commun. (Camb.).
Sigdel T.K, Mercer N., Nandoe S., Nicora C.D, Burnum-Johnson K., Qian W.J, Sarwal M.M.  2018.  Urinary Virome Perturbations in Kidney Transplantation. Front Med (Lausanne).
MacLean B.X, Pratt B.S, Egertson J.D, MacCoss M.J, Smith R.D, Baker E.S.  2018.  Using Skyline to Analyze Data-Containing Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry Dimensions. J. Am. Soc. Mass Spectrom..
Zheng X., Dupuis K.T, Aly N.A, Zhou Y., Smith F.B, Tang K., Smith R.D, Baker E.S.  2018.  Utilizing ion mobility spectrometry and mass spectrometry for the analysis of polycyclic aromatic hydrocarbons, polychlorinated biphenyls, polybrominated diphenyl ethers and their metabolites. Anal. Chim. Acta.


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