Organism Name # datasets Proteins Peptides Spectra False Spectra Acidiphilium_cryptum_JF-5 40 1454 7306 "123,944" 0 Actinosynnema_mirum_DSM_43827 85 2083 13975 "80,974" 0 Anabaena_variabilis 341 3324 35814 "456,600" 13 Anaeromyxobacter_dehalogenans 20 1250 7685 "54,092" 0 Anaplasma_phagocytophilium 129 690 3066 "8,363" 0 Arthrobacter_sp_FB24 353 3279 46122 "663,861" 29 Bacillus_anthracis_Ames 20 849 6487 "36,014" 0 Bacillus_anthracis_Sterne 158 2506 26165 "152,339" 0 Bacillus_subtilis_168 242 2435 39415 "709,179" 0 Bartonella_henselae_Houston-1 160 1245 36347 "508,803" 1 Borrelia_burdorferi_B31 104 877 19060 "193,743" 1 Brachybacterium_faecium_DSM_4810 78 2088 29248 "121,914" 0 Burkholderia_mallei 189 1970 33824 "270,609" 2 Candidatus_chloracidobacterium_thermophilum 111 563 2360 "6,037" 7 Caulobacter_crescentus_CB15 1016 2971 63773 "2,320,212" 41 Cellulomonas_flavigena_DSM_20109 103 2382 38033 "175,148" 0 Cenarchaeum_symbiosum 108 358 757 "4,172" 0 Chlorobaculum_tepidum_WT 94 1584 26561 "137,150" 0 Chloroflexus_aurantiacus 225 2736 44200 "323,036" 16 Clostridium_thermocellum 408 2110 61618 "1,140,251" 5 Cryptobacterium_curtum_DSM_15641 78 1115 17888 "75,903" 0 Cyanobacterium_synechocystis_PCC6803 279 2251 27351 "344,473" 0 Cyanothece_sp_ATCC51142 1404 3309 57219 "1,879,239" 0 Cyanothece_strain_ATCC51472 93 2146 20702 "134,879" 0 Cyanothece_strain_PCC7424 109 2182 20763 "91,389" 0 Cyanothece_strain_PCC7425 104 2590 27429 "114,498" 0 Cyanothece_strain_PCC7822 166 3230 37493 "336,052" 0 Cyanothece_strain_PCC8801 90 2399 23313 "145,714" 0 Cyanothece_strain_PCC8802 81 679 3958 "22,785" 0 Dehalococcoides_ethenogenes 437 1025 25378 "262,644" 0 Deinococcus_radiodurans_R1 368 2212 43409 "1,002,931" 0 Delta_proteobacterium_NaphS2 158 2210 13007 "94,378" 0 Desulfovibrio_desulfuricans_G20 463 2564 48057 "916,183" 28 Desulfovibrio_sp_ND132 92 2573 42717 "225,546" 0 Desulfovibrio_vulgaris_Hildenborough 218 2397 36518 "451,518" 0 Dethiosulfovibrio_peptidovorans_DSM_11002 78 1778 25287 "95,940" 0 Ehrlichia_chaffeensis 127 532 4045 "12,545" 0 Enterobacter_cloacae_SCF1 58 1793 19194 "235,721" 0 Escherichia_coli_BL21 191 1564 20792 "190,645" 0 Escherichia_coli_K-12 3925 3324 122114 "11,592,291" 461 Escherichia_coli_RK4353 31 1766 17089 "53,334" 0 Fibrobacter_succinogenes_S85 122 1505 17408 "265,219" 0 Geobacter_bemidjiensis_Bem_T 780 2566 33313 "682,897" 0 Geobacter_metallireducens_GS-15 155 2455 27442 "245,691" 0 Geobacter_sulfurreducens_PCA 1122 2770 45298 "2,597,915" 0 Geobacter_uraniumreducens 287 2779 42812 "401,586" 0 Haloferax_volcanii 34 1463 9502 "56,669" 0 Halogeometricum_borinquense_DSM_11551 83 2216 18776 "56,225" 0 Halorhabdus_utahensis_DSM_12940 84 2082 22987 "89,820" 0 Heliobacterium_modesticaldum 77 1549 22105 "107,100" 0 Kineococcus_radiotolerans_SRS30216 192 2742 38694 "480,705" 0 Kosmotoga_olearia_TBF_19-5-1 25 878 7219 "29,080" 0 Methanosarcina_barkeri 89 1852 24889 "116,224" 0 Methanospirillum_hungatei_JF-1 78 1722 23041 "60,300" 0 Methylophilales_HTCC2181 61 1172 20615 "104,603" 2 Mycobacterium_tuberculosis 647 2714 35206 "1,296,018" 7 Nakamurella_multipartita_DSM_44233 78 2171 19782 "57,582" 0 Nocardiopsis_dassonvillei_DSM_43111 80 1965 16507 "76,404" 0 Novosphingobium_aromaticivorans_F199 23 1563 12783 "75,850" 1 Opitutaceae_bacterium_TAV2 125 2229 20659 "292,644" 0 Pelagibacter_ubique_HTC1062 426 1201 30536 "1,294,945" 58 Pelobacter_carbinolicus_DSM_2380 22 830 4168 "19,078" 0 Prochlorococcus 121 1285 19310 "158,225" 0 Pseudomonas_aerunginosa 40 3054 24670 "109,854" 1 Pseudomonas_fluorescens_PfO-1 397 3437 44819 "535,883" 0 Pseudonocardia_sp 48 188 448 "1,406" 0 Ralstonia_pickettii 194 "5,786" 0 Rhodobacter_capsulatus_SB1003 495 2761 58894 "1,316,844" 76 Rhodobacter_sphaeroides_2.4.1 1639 3362 72977 "3,982,596" 47 Rhodopseudomonas_palustris 587 2743 25366 "247,373" 0 Roseiflexus_castenholzii 76 2537 28414 "91,063" 0 Saccharomonospora_viridis_DSM_43017 78 1918 15458 "39,384" 0 Salmonella_typhi_TY2 499 2729 50292 "9,832,722" 385 Salmonella_typhimurium_ATCC_14028 3701 3779 91496 "1,555,617" 28 Salmonella_typhimurium_LT2 823 3214 62399 "1,051,565" 3 Sanguibacter_keddieii_DSM_10542 78 2213 20489 "89,427" 0 Shewanella_amazonensis_SB2B 114 2079 27295 "469,397" 32 Shewanella_baltica_OS155 631 2988 47725 "1,874,615" 112 Shewanella_baltica_OS185 190 2853 41613 "395,867" 4 Shewanella_baltica_OS195 65 2193 23560 "175,237" 5 Shewanella_baltica_OS223 75 2158 22391 "92,424" 0 Shewanella_denitrificans_OS217 91 2313 25045 "240,069" 0 Shewanella_frigidimarina_NCIMB_400 66 2286 26819 "192,758" 7 Shewanella_loihica_PV-4 68 2082 27260 "181,814" 5 Shewanella_oneidensis_MR-1 3954 3307 94195 "5,561,459" 442 Shewanella_putrefaciens_200 64 2200 25524 "191,946" 2 Shewanella_putrefaciens_CN-32 78 2338 29135 "254,187" 14 Shewanella_putrefaciens_W3-18-1 80 1975 18900 "273,705" 12 Shewanella_sp_ANA-3 62 2154 25870 "145,474" 4 Shewanella_sp_MR-4 65 2052 25724 "195,547" 6 Shewanella_sp_MR-7 64 2217 29196 "178,776" 16 Sinorhizobium_medicae 40 2557 17954 "164,088" 2 Sinorhizobium_meliloti_1021 137 2547 21631 "581,060" 2 Slackia_heliotrinireducens_DSM_20476 79 1645 22440 "105,667" 1 Stackebrandtia_nassauensis_DSM_44728 104 2158 22213 "138,735" 0 Sulfolobus_acidocaldarius_DSM_639 33 1380 16093 "92,402" 0 Synechococcus_sp_PCC7002 1050 2606 52469 "1,842,452" 1 Syntrophobacter_fumaroxidans 80 1893 18846 "71,287" 0 Thermobispora_bispora_DSM_43833 78 1470 9193 "23,861" 0 Thermosynechococcus_elongatus_BP-1 137 1266 8161 "182,698" 0 Thermosynechococcus_sp_NAK55 47 1106 9587 "87,550" 0 Thermotoga_maritima 281 1526 52050 "544,795" 6 Thiocapsa_marina_DSM_5653T 130 1632 8577 "26,649" 0 Verrucomicrobium_sp_TAV1 32 2288 15059 "79,896" 0 Verrucomicrobium_sp_TAV5 33 2116 12893 "87,443" 2 Xylanimonas_cellulosilytica_DSM_15894 200 2487 41090 "319,030" 0 Yersinia_enterocolitica 86 1622 11983 "107,731" 2 Yersinia_pestis_CO92 210 2302 33289 "993,714" 19 Yersinia_pestis_KIM 240 1371 11084 "98,780" 0 Yersinia_pestis_Pestoides_F 99 2153 22980 "523,779" 16 Yersinia_pseudotuberculosis_IP_32953 400 2151 24690 "301,175" 11 Yersinia_pseudotuberculosis_PB1_Plus 99 2029 20729 "470,575" 16 35162 "229,537" "3,147,576" "70,455,991" 1951