Peptide File Extractor Console Change Log

Version 1.1.3519; August 20, 2009
	- New version of FileConcatenator.dll that allows for .Out and .Dta files to be locked by other programs
	- Added support for /O at the command line to specify the output folder
		- Note that the program will still create some temporary files in the folder containing hte input files,
		  but it will then move the final results files to the folder specified by /O
	- Added a 750 msec pause when displaying the program syntax
		- Useful if the user double clicks the .Exe from within Windows Explorer

Version 1.1.3481; July 13, 2009
	- Now looking for matching .out and _out.txt files in the working directory if /I is not specified
		- Previously, used the folder with the .Exe file
	- New versions of FileConcatenator.dll and PeptideFileExtractor.dll
		- Supports .out files with the new Sf (final score) column created by Bioworks 3.x
		- Example file:

  #   Rank/Sp      Id#     (M+H)+    deltCn   XCorr    Sp     Sf   Ions  Reference               Peptide
 ---  --------  --------  --------   ------  ------   -----  ----  ----  ---------               -------
  1.   1 / 53      11814 1772.84584  0.0000  1.8475   313.9  0.10  30/140 Q9VPL9|PROT_B     K.SLLVGTYKH@GCEMYR.Q
  2.   2 /  4      14175 1772.83058  0.1309  1.6057   567.6  0.12  38/150 Q8MYT0|PROT_C +1  K.IVQAIYDM*LGACSSNR.P
                   15973  Q9VW66|Q9VW66_DROME CG7646-PA, iso
  3.   3 / 94      11351 1772.84181  0.1572  1.5571   269.8  0.03  29/150 Q86CW5|PROT_D     R.NLKIADPSNQCTMGH@K.Y

Version 1.1.3378; April 1, 2009
	- New versions of FileConcatenator.dll and PeptideFileExtractor.dll

Version 1.1.3318; January 31, 2009
	- Updated program syntax to mention ability to concatenate a dataset's .dta files in a folder

Version 1.1.3258; December 2, 2008
	- New version of FileConcatenator.dll
		- Updated to allow for blank .dta or .out files
	- Now displaying the syntax information in the console window, instead of via a popup window

Version 1.1.2992; March 11, 2008
	- New versions of FileConcatenator.dll and PeptideFileExtractor.dll
	- Updated to Visual Studio 2005 (.NET 2.0)

Version 1.0.2889; November 30, 2007
	- Updated to only concatenate .dta files if no .out files are found matching the specified Dataset but .Dta files are present
		- To use this mode, call the program with the dataset name as the first parameter

Version 1.0.2854; October 25, 2007
	- Updated to show the progress of _Out.txt and _Dta.txt creation
	- Updated to allow wildcards in the dataset name 
	- Altered to specify the dataset name at the command line as a non-switch parameter instead of using /D
		- PeptideFileExtractorConsole.exe QC_Shew*
	- Removed the /FhtD and /SynD command line switches since those thresholds are not actually used by PeptideFileExtractor.dll

Version 1.0.2839; October 10, 2007
	- Initial release