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MS Proteomics - Software and Tools - Peak Finder

Peak Finder

The Peak Finder program is a LabView application (compiled to a Windows .Exe) that can be used to compute the peak capacity of chromatographic separations. The peak capacity is defined as the number of compounds that can be separated with baseline resolution in a given separation space. The Peak Finder uses a robust method for computing peak capacity, fitting all of the peaks in a chromatogram with a Gaussian peak, then computing the median peak width of each peak and dividing the separation space (time) by the median peak width. The user can step through the program and examine the fit for each peak, modifying the peak width and elution time for each peak so that the Gaussian peak best represents the actual peak. Peaks that the program found but are not real peaks can be excluded from the peak list and thus all subsequent calculations.

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Software Details
Version n/a Requirements Microsoft NET Framework 1.1
Date Updated August 11, 2007 File Size (Software Tool) 14.7 MB (ZIP)
Registration Required No File size (Source Code) 1.5 MB (ZIP)
Developers Matthew Monroe
Comments n/a

 

Acknowledgment

All publications that utilize this software should provide appropriate acknowledgement to PNNL and the OMICS.PNL.GOV website. However, if the software is extended or modified, then any subsequent publications should include a more extensive statement, using this text or a similar variant:

Portions of this research were supported by the NIH National Center for Research Resources (Grant RR018522), the W.R. Wiley Environmental Molecular Science Laboratory (a national scientific user facility sponsored by the U.S. Department of Energy's Office of Biological and Environmental Research and located at PNNL), and the National Institute of Allergy and Infectious Diseases (NIH/DHHS through interagency agreement Y1-AI-4894-01). PNNL is operated by Battelle Memorial Institute for the U.S. Department of Energy under contract DE-AC05-76RL0 1830.

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